Samatova, Nagiza: search on Z-Library

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1

Theory-guided Data Science: A New Paradigm for Scientific Discovery from Data

Karpatne, Anuj, Atluri, Gowtham, Faghmous, James, Steinbach, Michael, Banerjee, Arindam, Ganguly, Auroop, Shekhar, Shashi, Samatova, Nagiza, Kumar, Vipin

Journal:

IEEE Transactions on Knowledge and Data Engineering

Year:

2017

Language:

english

File:

PDF, 5.38 MB

english, 2017

2

[IEEE 2010 IEEE International Conference on Data Mining Workshops (ICDMW) - Sydney, TBD, Australia (2010.12.13-2010.12.13)] 2010 IEEE International Conference on Data Mining Workshops - Detecting and Tracking Community Dynamics in Evolutionary Networks

Chen, Zhengzhang, Wilson, Kevin A., Jin, Ye, Hendrix, William, Samatova, Nagiza F.

Year:

2010

Language:

english

File:

PDF, 397 KB

english, 2010

3

Data-driven, data-intensive computing for modelling and analysis of biological networks: application to bioethanol production

Park, Byung-Hoon, Samatova, Nagiza F, Karpinets, Tatiana, Jallouk, Andrew, Molony, Scott, Horton, Scott, Arcangeli, Steven

Journal:

Journal of Physics Conference Series

Year:

2007

Language:

english

File:

PDF, 502 KB

english, 2007

4

[IEEE Distributed Processing Symposium (IPDPS) - Miami, FL, USA (2008.04.14-2008.04.18)] 2008 IEEE International Symposium on Parallel and Distributed Processing - Parallel, scalable, memory-efficient backtracking for combinatoria modeling of large-scale biological systems

Park, Byung-Hoon, Schmidt, Matthew, Thomas, Kevin, Karpinets, Tatiana, Samatova, Nagiza F.

Year:

2008

Language:

english

File:

PDF, 359 KB

english, 2008

5

[IEEE 2016 16th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid) - Cartagena, Colombia (2016.5.16-2016.5.19)] 2016 16th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid) - Usage Pattern-Driven Dynamic Data Layout Reorganization

Tang, Houjun, Byna, Suren, Harenberg, Steve, Zou, Xiaocheng, Zhang, Wenzhao, Wu, Kesheng, Dong, Bin, Rubel, Oliver, Bouchard, Kristofer, Klasky, Scott, Samatova, Nagiza F.

Year:

2016

Language:

english

File:

PDF, 534 KB

english, 2016

6

Anomaly detection in dynamic networks: a survey

Ranshous, Stephen, Shen, Shitian, Koutra, Danai, Harenberg, Steve, Faloutsos, Christos, Samatova, Nagiza F.

Journal:

Wiley Interdisciplinary Reviews: Computational Statistics

Year:

2015

Language:

english

File:

PDF, 538 KB

english, 2015

7

A graph-based approach to find teleconnections in climate data

Kawale, Jaya, Liess, Stefan, Kumar, Arjun, Steinbach, Michael, Snyder, Peter, Kumar, Vipin, Ganguly, Auroop R., Samatova, Nagiza F., Semazzi, Fredrick

Journal:

Statistical Analysis and Data Mining

Year:

2013

Language:

english

File:

PDF, 7.16 MB

english, 2013

8

[IEEE 2007 IEEE/ACS International Conference on Computer Systems and Applications - Amman, Jordan (2007.05.13-2007.05.16)] 2007 IEEE/ACS International Conference on Computer Systems and Applications - The Maximum Common Subgraph Problem: Faster Solutions via Vertex Cover

Abu-Khzam, Faisal N., Samatova, Nagiza F., Rizk, Mohamad A., Langston, Michael A.

Year:

2007

Language:

english

File:

PDF, 209 KB

english, 2007

9

[IEEE 2012 IEEE International Conference on Cluster Computing (CLUSTER) - Beijing, China (2012.09.24-2012.09.28)] 2012 IEEE International Conference on Cluster Computing - Enabling Fast, Noncontiguous GPU Data Movement in Hybrid MPI+GPU Environments

Jenkins, John, Dinan, James, Balaji, Pavan, Samatova, Nagiza F., Thakur, Rajeev

Year:

2012

Language:

english

File:

PDF, 298 KB

english, 2012

10

[IEEE 2008 IEEE/ACS International Conference on Computer Systems and Applications (AICCSA) - Doha, Qatar (2008.03.31-2008.04.4)] 2008 IEEE/ACS International Conference on Computer Systems and Applications - Rapid and robust ranking of text documents in a dynamically changing corpus

Park, Byung-Hoon, Samatova, Nagiza F., Munavalli, Rajesh, Krishnamurthy, Ramya, Kettani, Houssain, Geist, Al

Year:

2008

Language:

english

File:

PDF, 422 KB

english, 2008

11

SDM center technologies for accelerating scientific discoveries

Shoshani, Arie, Altintas, Ilkay, Choudhary, Alok, Critchlow, Terence, Kamath, Chandrika, Ludäscher, Bertram, Nieplocha, Jarek, Parker, Steve, Ross, Rob, Samatova, Nagiza, Vouk, Mladen

Journal:

Journal of Physics Conference Series

Year:

2007

Language:

english

File:

PDF, 633 KB

english, 2007

12

The Application of the Weighted k -Partite Graph Problem to the Multiple Alignment for Metabolic Pathways

Chen, Wenbin, Hendrix, William, Schmidt, Matthew, Samatova, Nagiza F.

Journal:

Journal of Computational Biology

Year:

2017

Language:

english

File:

PDF, 356 KB

english, 2017

13

A scalable, parallel algorithm for maximal clique enumeration

Matthew C. Schmidt, Nagiza F. Samatova, Kevin Thomas, Byung-Hoon Park

Journal:

Journal of Parallel and Distributed Computing

Year:

2009

Language:

english

File:

PDF, 3.92 MB

english, 2009

14

ISABELA for effective in situ compression of scientific data

Sriram Lakshminarasimhan, Neil Shah, Stephane Ethier, Seung-Hoe Ku, C.S. Chang, Scott Klasky, Rob Latham, Rob Ross, Nagiza F. Samatova

Journal:

Concurrency and Computation: Practice and Experience

Year:

2012

Language:

english

File:

PDF, 3.70 MB

english, 2012

15

[IEEE 2012 IEEE 12th International Conference on Data Mining Workshops - Brussels, Belgium (2012.12.10-2012.12.10)] 2012 IEEE 12th International Conference on Data Mining Workshops - Hierarchical Classifier-Regression Ensemble for Multi-phase Non-linear Dynamic System Response Prediction: Application to Climate Analysis

Gonzalez, Doel L., Chen, Zhengzhang, Tetteh, Isaac K., Pansombut, Tatdow, Semazzi, Fredrick, Kumar, Vipin, Melechko, Anatoli, Samatova, Nagiza F.

Year:

2012

Language:

english

File:

PDF, 2.44 MB

english, 2012

16

[IEEE 2013 IEEE International Conference on Data Mining (ICDM) - Dallas, TX, USA (2013.12.7-2013.12.10)] 2013 IEEE 13th International Conference on Data Mining - Coupled Heterogeneous Association Rule Mining (CHARM): Application Toward Inference of Modulatory Climate Relationships

II, Doel L. Gonzalez, Pendse, Saurabh V., Padmanabhan, Kanchana, Angus, Michael P., Tetteh, Isaac K., Srinivas, Shashank, Villanes, Andrea, Semazzi, Fredrick, Kumar, Vipin, Samatova, Nagiza F.

Year:

2013

Language:

english

File:

PDF, 931 KB

english, 2013

17

[Society for Industrial and Applied Mathematics Proceedings of the 2016 SIAM International Conference on Data Mining - ()] Proceedings of the 2016 SIAM International Conference on Data Mining - A Scalable Approach for Outlier Detection in Edge Streams Using Sketch-based Approximations

Ranshous, Stephen, Harenberg, Steve, Sharma, Kshitij, Samatova, Nagiza F.

Language:

english

File:

PDF, 1.03 MB

english

18

[Society for Industrial and Applied Mathematics Proceedings of the 2016 SIAM International Conference on Data Mining - ()] Proceedings of the 2016 SIAM International Conference on Data Mining - Online Prediction of User Actions through an Ensemble Vote from Vector Representation and Frequency Analysis Models

Moon, Changsung, Medd, Dakota, Jones, Paul, Harenberg, Steve, Oxbury, William, Samatova, Nagiza F.

Language:

english

File:

PDF, 1.11 MB

english

19

RACHET: An Efficient Cover-Based Merging of Clustering Hierarchies from Distributed Datasets

Nagiza F. Samatova, George Ostrouchov, Al Geist, Anatoli V. Melechko

Journal:

Distributed and Parallel Databases

Year:

2002

Language:

english

File:

PDF, 465 KB

english, 2002

20

[IEEE 2012 41st International Conference on Parallel Processing (ICPP) - Pittsburgh, PA, USA (2012.09.10-2012.09.13)] 2012 41st International Conference on Parallel Processing - MLOC: Multi-level Layout Optimization Framework for Compressed Scientific Data Exploration with Heterogeneous Access Patterns

Gong, Zhenhuan, Rogers, Terry, Jenkins, John, Kolla, Hemanth, Ethier, Stephane, Chen, Jackie, Ross, Robert, Klasky, Scott, Samatova, Nagiza F.

Year:

2012

Language:

english

File:

PDF, 291 KB

english, 2012

21

[WORLD SCIENTIFIC Proceedings of the Pacific Symposium - Kohala Coast, Hawaii, USA (5 – 9 January 2009)] Biocomputing 2009 - PAIRWISE ALIGNMENT OF INTERACTION NETWORKS BY FAST IDENTIFICATION OF MAXIMAL CONSERVED PATTERNS

TIAN, WENHONG, SAMATOVA, NAGIZA F.

Language:

english

File:

PDF, 1.92 MB

english

22

[ACM Press the 22nd International Conference - Limassol, Cyprus (2017.03.13-2017.03.16)] Proceedings of the 22nd International Conference on Intelligent User Interfaces - IUI '17 - A Network-Fusion Guided Dashboard Interface for Task-Centric Document Curation

Jones, Paul, Sharma, Shivani, Moon, Changsung, Samatova, Nagiza F.

Year:

2017

Language:

english

File:

PDF, 1.81 MB

english, 2017

23

[IEEE 2009 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Washington, D.C., USA (2009.11.1-2009.11.4)] 2009 IEEE International Conference on Bioinformatics and Biomedicine - An Algorithm for the Discovery of Phenotype Related Metabolic Pathways

Schmidt, Matthew C., Samatova, Nagiza F.

Year:

2009

Language:

english

File:

PDF, 208 KB

english, 2009

24

Vector space model for the generalized parts grouping problem

Nagiza F. Samatova, Thomas E. Potok, Michael R. Leuze

Journal:

Robotics and Computer-Integrated Manufacturing

Year:

2001

Language:

english

File:

PDF, 128 KB

english, 2001

25

On parameterized complexity of the Multi-MCS problem

Wenbin Chen, Matthew C. Schmidt, Nagiza F. Samatova

Journal:

Theoretical Computer Science

Year:

2009

Language:

english

File:

PDF, 556 KB

english, 2009

26

Spice: discovery of phenotype-determining component interplays

Zhengzhang Chen, Kanchana Padmanabhan, Andrea M Rocha, Yekaterina Shpanskaya, James R Mihelcic, Kathleen Scott, Nagiza F Samatova

Journal:

BMC Systems Biology

Year:

2012

Language:

english

File:

PDF, 3.92 MB

english, 2012

27

[IEEE 2011 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Atlanta, GA, USA (2011.11.12-2011.11.15)] 2011 IEEE International Conference on Bioinformatics and Biomedicine - Detecting Pathway Cross-Talks by Analyzing Conserved Functional Modules across Multiple Phenotype-Expressing Organisms

Wilson, Kevin, Rocha, Andrea M., Padmanabhan, Kanchana, Wang, Kuangyu, Chen, Zhengzhang, Jin, Ye, Mihelcic, James R., Samatova, Nagiza F.

Year:

2011

Language:

english

File:

PDF, 621 KB

english, 2011

28

Community detection in large-scale networks: a survey and empirical evaluation

Harenberg, Steve, Bello, Gonzalo, Gjeltema, L., Ranshous, Stephen, Harlalka, Jitendra, Seay, Ramona, Padmanabhan, Kanchana, Samatova, Nagiza

Journal:

Wiley Interdisciplinary Reviews: Computational Statistics

Year:

2014

Language:

english

File:

PDF, 934 KB

english, 2014

29

[ACM Press the 29th International Conference - Chicago, IL, USA (2017.06.27-2017.06.29)] Proceedings of the 29th International Conference on Scientific and Statistical Database Management - SSDBM '17 - Mining Persistent and Discriminative Communities in Graph Ensembles

Harenberg, Steve, Chaudhary, Mandar, Samatova, Nagiza F.

Year:

2017

Language:

english

File:

PDF, 685 KB

english, 2017

30

Sampling streaming data with replacement

Byung-Hoon Park, George Ostrouchov, Nagiza F. Samatova

Journal:

Computational Statistics & Data Analysis

Year:

2007

Language:

english

File:

PDF, 345 KB

english, 2007

31

In silico Discovery of Enzyme–Substrate Specificity-determining Residue Clusters

Gong-Xin Yu, Byung-Hoon Park, Praveen Chandramohan, Rajesh Munavalli, Al Geist, Nagiza F. Samatova

Journal:

Journal of Molecular Biology

Year:

2005

Language:

english

File:

PDF, 427 KB

english, 2005

32

[IEEE 2012 IEEE International Conference on Data Engineering (ICDE 2012) - Arlington, VA, USA (2012.04.1-2012.04.5)] 2012 IEEE 28th International Conference on Data Engineering - ISOBAR Preconditioner for Effective and High-throughput Lossless Data Compression

Schendel, Eric R., Jin, Ye, Shah, Neil, Chen, Jackie, Chang, C.S., Ku, Seung-Hoe, Ethier, Stephane, Klasky, Scott, Latham, Robert, Ross, Robert, Samatova, Nagiza F.

Year:

2012

Language:

english

File:

PDF, 1.04 MB

english, 2012

33

Complex biomarker discovery in neuroimaging data: Finding a needle in a haystack

Atluri, Gowtham, Padmanabhan, Kanchana, Fang, Gang, Steinbach, Michael, Petrella, Jeffrey R., Lim, Kelvin, MacDonald, Angus, Samatova, Nagiza F., Doraiswamy, P. Murali, Kumar, Vipin

Journal:

NeuroImage: Clinical

Year:

2013

Language:

english

File:

PDF, 856 KB

english, 2013

34

[IEEE 2016 16th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid) - Cartagena, Colombia (2016.5.16-2016.5.19)] 2016 16th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid) - AMRZone: A Runtime AMR Data Sharing Framework for Scientific Applications

Zhang, Wenzhao, Tang, Houjun, Harenberg, Steve, Byna, Surendra, Zou, Xiaocheng, Devendran, Dharshi, Martin, Daniel F., Wu, Kesheng, Dong, Bin, Klasky, Scott, Samatova, Nagiza F.

Year:

2016

Language:

english

File:

PDF, 583 KB

english, 2016

35

The sorting direct method for stochastic simulation of biochemical systems with varying reaction execution behavior

James M. McCollum, Gregory D. Peterson, Chris D. Cox, Michael L. Simpson, Nagiza F. Samatova

Journal:

Computational Biology and Chemistry

Year:

2006

Language:

english

File:

PDF, 896 KB

english, 2006

36

THE WAR.

Atluri, Gowtham, Padmanabhan, Kanchana, Fang, Gang, Steinbach, Michael, Petrella, Jeffrey R., Lim, Kelvin, MacDonald, Angus, Samatova, Nagiza F., Doraiswamy, P. Murali, Kumar, Vipin

Journal:

Year:

1914

Language:

english

File:

PDF, 1008 KB

english, 1914

37

Processing MPI Derived Datatypes on Noncontiguous GPU-Resident Data

Jenkins, John, Dinan, James, Balaji, Pavan, Peterka, Tom, Samatova, Nagiza F., Thakur, Rajeev

Journal:

IEEE Transactions on Parallel and Distributed Systems

Year:

2014

Language:

english

File:

PDF, 776 KB

english, 2014

38

In-silicoidentification of phenotype-biased functional modules

Padmanabhan, Kanchana, Wilson, Kevin, Rocha, Andrea M, Wang, Kuangyu, Mihelcic, James R, Samatova, Nagiza F

Journal:

Proteome Science

Year:

2012

Language:

english

File:

PDF, 610 KB

english, 2012

39

On the parameterized complexity of the Multi-MCT and Multi-MCST problems

Wenbin Chen, Matthew C. Schmidt, Nagiza F. Samatova

Journal:

Journal of Combinatorial Optimization

Year:

2011

Language:

english

File:

PDF, 244 KB

english, 2011

40

[IEEE Distributed Processing, Workshops and Phd Forum (IPDPSW) - Anchorage, AK, USA (2011.05.16-2011.05.20)] 2011 IEEE International Symposium on Parallel and Distributed Processing Workshops and Phd Forum - Sensitive and Specific Identification of Protein Complexes in "Perturbed" Protein Interaction Networks from Noisy Pull-Down Data

Hendrix, William, Karpinets, Tatiana, Park, Byung-Hoon, Schendel, Eric, Choudhary, Alok, Samatova, Nagiza F.

Year:

2011

Language:

english

File:

PDF, 872 KB

english, 2011

41

[ACM Press 2011 International Conference for High Performance Computing, Networking, Storage and Analysis - Seattle, Washington (2011.11.12-2011.11.18)] Proceedings of 2011 International Conference for High Performance Computing, Networking, Storage and Analysis on - SC '11 - ISABELA-QA

Lakshminarasimhan, Sriram, Klasky, Scott, Latham, Robert, Ross, Robert, Samatova, Nagiza F., Jenkins, John, Arkatkar, Isha, Gong, Zhenhuan, Kolla, Hemanth, Ku, Seung-Hoe, Ethier, Stephane, Chen, Jacki

Year:

2011

Language:

english

File:

PDF, 3.21 MB

english, 2011

42

Cultivation and quantitative proteomic analyses of acidophilic microbial communities

VerBerkmoes, Nathan C, Power, Mary E, Samatova, Nagiza F, Carver, Rudolf L, Hettich, Robert L, Banfield, Jillian F, Belnap, Christopher P, Pan, Chongle

Journal:

The ISME Journal

Year:

2009

Language:

english

File:

PDF, 545 KB

english, 2009

43

Solving the maximum duo-preservation string mapping problem with linear programming

Chen, Wenbin, Chen, Zhengzhang, Samatova, Nagiza F., Peng, Lingxi, Wang, Jianxiong, Tang, Maobin

Journal:

Theoretical Computer Science

Year:

2014

Language:

english

File:

PDF, 285 KB

english, 2014

44

[IEEE 2012 IEEE International Conference on Cluster Computing (CLUSTER) - Beijing, China (2012.09.24-2012.09.28)] 2012 IEEE International Conference on Cluster Computing - Improving I/O Throughput with PRIMACY: Preconditioning ID-Mapper for Compressing Incompressibility

Shah, Neil, Schendel, Eric R., Lakshminarasimhan, Sriram, Pendse, Saurabh V., Rogers, Terry, Samatova, Nagiza F.

Year:

2012

Language:

english

File:

PDF, 881 KB

english, 2012

45

Sex Differences in Cognitive Decline in Subjects with High Likelihood of Mild Cognitive Impairment due to Alzheimer’s disease

Sohn, Dongwha, Shpanskaya, Katie, Lucas, Joseph E., Petrella, Jeffrey R., Saykin, Andrew J., Tanzi, Rudolph E., Samatova, Nagiza F., Doraiswamy, P. Murali

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 1.01 MB

english, 2018

46

Theoretical underpinnings for maximal clique enumeration on perturbed graphs

William Hendrix, Matthew C. Schmidt, Paul Breimyer, Nagiza F. Samatova

Journal:

Theoretical Computer Science

Year:

2010

Language:

english

File:

PDF, 2.07 MB

english, 2010

47

Global Alignment of Pairwise Protein Interaction Networks for Maximal Common Conserved Patterns

Tian, Wenhong, Samatova, Nagiza F.

Journal:

International Journal of Genomics

Year:

2013

Language:

english

File:

PDF, 691 KB

english, 2013

48

Toward Personalized Network Biomarkers in Alzheimer's Disease: Computing Individualized Genomic and Protein Crosstalk Maps

Padmanabhan, Kanchana, Shpanskaya, Katie, Bello, Gonzalo, Doraiswamy, P. Murali, Samatova, Nagiza F.

Journal:

Frontiers in Aging Neuroscience

Year:

2017

Language:

english

File:

PDF, 1016 KB

english, 2017

49

Quantitative proteomic analyses of the response of acidophilic microbial communities to different pH conditions

Belnap, Christopher P, Pan, Chongle, Denef, Vincent J, Samatova, Nagiza F, Hettich, Robert L, Banfield, Jillian F

Journal:

The ISME Journal

Year:

2011

Language:

english

File:

PDF, 526 KB

english, 2011

50

High performance statistical computing with parallel R: applications to biology and climate modelling

Samatova, Nagiza F, Branstetter, Marcia, Ganguly, Auroop R, Hettich, Robert, Khan, Shiraj, Kora, Guruprasad, Li, Jiangtian, Ma, Xiaosong, Pan, Chongle, Shoshani, Arie, Yoginath, Srikanth

Journal:

Journal of Physics Conference Series

Year:

2006

Language:

english

File:

PDF, 383 KB

english, 2006

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